CDS
| Accession Number | TCMCG072C25418 |
| gbkey | CDS |
| Protein Id | XP_021860220.1 |
| Location | complement(join(38960..39026,39636..39704,39837..39953,40199..40311,40436..40510,40801..40926,41964..42091,42179..42232,43122..43733,45346..45529,45623..45766,45843..45917,46511..46581,47490..47592,47692..47918,48170..48287,49045..49175,49643..49667)) |
| Gene | LOC110799298 |
| GeneID | 110799298 |
| Organism | Spinacia oleracea |
Protein
| Length | 812aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA396054 |
| db_source | XM_022004528.1 |
| Definition | katanin p80 WD40 repeat-containing subunit B1 homolog isoform X6 [Spinacia oleracea] |
EGGNOG-MAPPER Annotation
| COG_category | Z |
| Description | May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko04812 [VIEW IN KEGG] |
| KEGG_ko |
ko:K18643
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0000151
[VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0031461 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0080008 [VIEW IN EMBL-EBI] GO:1902494 [VIEW IN EMBL-EBI] GO:1990234 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCGAAACGTGCTTATAAGCTCCAGGAATTTGCGGCACACTCAGCAAATGTGAATTGTCTTCGGATAGGGAAGAAAGCATGCCGCCTTCTTCTGACGGGTGGAGATGATCATAAAGTTAACTTGTGGTCAATTGGCAAACCCACTTCTTTAATGAGCCTATGTGGCCATACCACTCCTGTCGAGAGCTTGGCCTTTGATTCGACAGAGGTGTTGGTGCTTGGTGGAGCTTCTTCTGGTACAGTGAAGTTATGGGATCTGCAAGAAGCAAAGATGGTTCGAACTCTTACTGGTCATAGATCCAATTGCACTTCTGTTGAATTCCACCCATTTGGAGAATTTTTTGCATCTGGTTCAGCAGACACTGACTTAAAGATCTGGGATATAAGAAAAAAGGGATGTATTCACACATACAAGGGGCACAATCTCGGTATCAATGCTATTAAGTTCACACCTGATGGTCGATGGGTTGTTTCTGGTGGATCTGATAATGTTGTAAAGGTATGGGATTTAACTGCTGGAAAGTTGTTGCATGATTTCAAGTTTCATAATGGCCCTATCACATCCTTAGACTTCCACCCTCTCGAGTTCCTTCTAGCCACAGGTTCAGCAGATAGAACTGTTAAATTCTGGGATTTGGAAACTTTTGAAATGATTGGATCTGCCAGGCCCGAGGCTGCAGGAGTGCGTGCGCTAACCTTTCATCCTGATGGAAGGACCCTTTTTTGTGGATATGACAATAACCTGAAGGTTTATTCATGGGAGCCTGTAATATGTCATGATTCCATTGACGTTGGATGGTCAACACTGGGTGATCTCTGCATACGCGAAGGAAATCTCATAGGTTGCTCTTCTTATCGGAACTCCATTGGTGTTTGGGTCGCTGATCTCTCATGTGTTGAGCCATACGGGACTGCTGATTCTGGCGCACCTCAAGAGAGAAGTCCTGTTGAGCTGAAGGCTGACATGCGAGAAAGTCAGTCTGCTGAAGCAACGTCAACTGTTGGGTCTTCTTTCGGCTCTCGTTCCTCATCCCCAGATACCGATTCTAAAGATATTAAGAACATATATGTGGACTATGAGAAGCCAATTAGCTCTCGCAAAACGCGCTTACGGAATACATCAAAACCGGTGCCGTCTGATTTGAAGGAAACCAGCAAGTTATCGTCTAAAAAACACAATACTCCTAATGCTACATCTGGAAAATCTAATGGTCAAGCTGGTGGGAGGTCATTTATTACCCCAACCTTTGTTCCTAGAGACAGTTCAAGTGGTAAAAGTTTTTCCAATTCTAGAAGAGAGTCAATTACACCTGCAAAGCCTGGTAGTGTGGGGTCGATCAAGGCTACATACACAAGACAGTCATCCAAGAGCAAGTATGATGTGGATGCTGCAGATCCAAATTTCCTTGATAGGTTTGTACTGGAAGTGGGAACTAGAGACAGTTCAGGTGGCAAATGTTTTGCAAATTCTAGAAGAGAATCAATCGCACCTTCAAAGCCTACACTAACAAGGATGTCATCCAGGACCAAATTTGATATAGATGATGCAGATCCAAATTTCCTTGATAGGCTTGTACTGGAAGTGGGAGCTAAGGATTTAGATGGAGACAAGAATCCAACTCCAGAAAGTTTTGAAGAGAAGTTTGAAGAAAAGCCATCTCCTCCAATAGTTTCTGACCCTCAGAGTGGCGGTGAGCCCTTTGATCGTCAAGAGATGCAAAGTGTAAAAGTGGCAGATGGAGTTGCTCATGGTAGGACACGGTCTCTTGTTGAGAAATTCGAAAGGGGAAGATTTGTGGGCAGTGAAGATCAAACAATCAGCGCATCCCCTGATGTCGTTGCTGATAGGATTAACAGCTCTGCGACGCTAAAAGAAGAGCCTCAAGTCTCTGGTAGAGAATCGCCCTCAGCAAGCGATGCATATGTTATTGAAGATCTTATGGAAAATCATGATGCTCTACTCAGTGGTCTTCGTGCTCGCCTCACAAAGTTGCAGATGGTGCGGCACTTGTGGGAACGAAATGATATAAAAGGCGCCATTACAGCTCTGAAGACGTTGCCTGATCATTTTGTCCAGGCTGACGTAATTAGCGTTTTTGCGGAGAAGATGGAAATTGTTACCATGGACTTGTTCTCCTGTATGCTACCTATACTGGTGGGTCTCCTGGATAGCAAGATGGAAAGGCATGCAAAAATGTCTTTGGAGTTATTGCTGAAGCTTGTTGCATGTTATGGGCCTACAATACGCTCAACCATCTCAGCACCACGTTGTGTAGGTGTTGATCTTCATCAAGAAGAAAGGATTGCGTGCTGCAAACAGTGTTTTATCCAACTGCAGCAGATACAAGGACTTCTTCCTGCACTTGCCAGGAAGGGTGGATCAGTTGCAAGATCTGCTTTGGAATTGAATCTAATACTTCAAGATCATAGCGTATAA |
| Protein: MAKRAYKLQEFAAHSANVNCLRIGKKACRLLLTGGDDHKVNLWSIGKPTSLMSLCGHTTPVESLAFDSTEVLVLGGASSGTVKLWDLQEAKMVRTLTGHRSNCTSVEFHPFGEFFASGSADTDLKIWDIRKKGCIHTYKGHNLGINAIKFTPDGRWVVSGGSDNVVKVWDLTAGKLLHDFKFHNGPITSLDFHPLEFLLATGSADRTVKFWDLETFEMIGSARPEAAGVRALTFHPDGRTLFCGYDNNLKVYSWEPVICHDSIDVGWSTLGDLCIREGNLIGCSSYRNSIGVWVADLSCVEPYGTADSGAPQERSPVELKADMRESQSAEATSTVGSSFGSRSSSPDTDSKDIKNIYVDYEKPISSRKTRLRNTSKPVPSDLKETSKLSSKKHNTPNATSGKSNGQAGGRSFITPTFVPRDSSSGKSFSNSRRESITPAKPGSVGSIKATYTRQSSKSKYDVDAADPNFLDRFVLEVGTRDSSGGKCFANSRRESIAPSKPTLTRMSSRTKFDIDDADPNFLDRLVLEVGAKDLDGDKNPTPESFEEKFEEKPSPPIVSDPQSGGEPFDRQEMQSVKVADGVAHGRTRSLVEKFERGRFVGSEDQTISASPDVVADRINSSATLKEEPQVSGRESPSASDAYVIEDLMENHDALLSGLRARLTKLQMVRHLWERNDIKGAITALKTLPDHFVQADVISVFAEKMEIVTMDLFSCMLPILVGLLDSKMERHAKMSLELLLKLVACYGPTIRSTISAPRCVGVDLHQEERIACCKQCFIQLQQIQGLLPALARKGGSVARSALELNLILQDHSV |